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Which of the following is your "C-value"?


A) RNA size
B) genome size
C) chromosome size
D) DNA size

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Match the following techniques with the descriptions listed below. -used to compare the gene expression patterns of identical cells under different conditions


A) whole-genome shotgun sequencing
B) Illumina/Solexa sequencing
C) Sanger sequencing
D) DNA microarray analysis
E) gene knockout
F) gene knockdown

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For each of the following statements, choose the most appropriate macromolecule being studied or manipulated from the list below. -genomics


A) DNA
B) mRNA/cDNA
C) protein

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Which of these statements best describes the human genome?


A) There are about 12 000 genes that do not encode proteins.
B) Each gene averages 30 regulatory sequences for expression.
C) There are no pseudogenes.
D) There are, on average, 10 exons per gene.

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Which of the following is NOT a model organism whose genomes were sequenced as part of the original Human Genome Project?


A) Mus musculus (mouse)
B) Escherichia coli (bacteria)
C) Drosophila melanogaster (fruit fly)
D) Danio rerio (zebrafish)

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Which of the following is NOT considered a source of evolving genes?


A) a gene duplication from unequal crossing-over
B) a gene duplication from replicating transposable elements
C) a gene duplication from crossing-over
D) an exon shuffling

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What are the relationships among the following types of organisms with respect to genome size: viruses, bacteria, archaea, and eukaryotes?

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Viruses have the smallest genomes of these four types of organisms. Bacterial and archaean genomes are similar in size to each other. Eukaryotes have the largest genome sizes of these four groups. There is overlap among the groups, however, in that viral genome sizes overlap with genomes from archaea/bacteria, and eukaryote genome sizes overlap with genomes from archaea/bacteria.

Match each of the following terms with its correct definition. -transcriptome


A) all proteins that can be produced by a cell
B) all transcripts that are produced by a cell
C) the study of all of the proteins produced from an organism's genome
D) the study of genome sequences for several organisms
E) the study of the whole genome of an organism
F) the use of computer programs to extract biological information from sequence data
G) the study of all transcripts produced from an organism's genome

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Which of the following is the reason why the genes of living organisms tend to be similar to each other?


A) All genes are old.
B) All genes are new.
C) They have evolved from ancestral genes in ancestral organisms.
D) They have not evolved from ancestral genes in ancestral organisms.

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For each of the following statements, choose the most appropriate macromolecule being studied or manipulated from the list below. -cellular proteomics


A) DNA
B) mRNA/cDNA
C) protein

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Match the following techniques with the descriptions listed below. -used to decrease a gene's expression to see the effect


A) whole-genome shotgun sequencing
B) Illumina/Solexa sequencing
C) Sanger sequencing
D) DNA microarray analysis
E) gene knockout
F) gene knockdown

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How can microarrays help us understand cellular functions?


A) Microarrays let us study different cells under different conditions.
B) Microarrays let us directly measure protein expression in individual cells.
C) Microarrays, by hybridizing cDNAs to DNA sequences already present on a chip, let us identify which portions of a genome are being expressed in a cell at a particular time.
D) Microarrays let us identify which DNA sequences are present in a particular cell type under certain conditions.

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In the microarray shown in your textbook, the cDNAs were labelled with red and green fluorescent tags. How then do you end up with spots on the microarray emitting yellow light?


A) In light, red and green are two of the primary colours, and the combination of the two will produce yellow light.
B) The yellow light comes from the laser, and a yellow spot indicates that neither cDNA hybridized to that spot on the microarray.
C) The over expression of one cDNA relative to the other will skew the colour pattern of the spot on the microarray. This results in the yellow colour.
D) The colour choice was an arbitrary decision by the artist and doesn't reflect how the process actually works.

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Which of the following is NOT an example of a current use of bioinformatics?


A) locating individual genes in a genomic sequence
B) aligning sequences in databases to determine similarities between organisms
C) predicting the structure and function of gene products
D) determining the final protein structure of novel proteins based on just the nucleotide sequence

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D

Which of the following is NOT added to a single-stranded DNA in order to perform a successful sequencing reaction?


A) a mixture of the four dideoxyribonucleotides, not labelled with a different fluorescent label
B) a DNA primer
C) a mixture of the four deoxyribonucleotides
D) a DNA polymerase

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Which of the following is the name of the study of the complete set of transcripts in a cell?


A) genome
B) transcriptome
C) proteome
D) interactome

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What are the main differences among the studies of genomics, transcriptomics, and proteomics?

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Genomics is the study of whole genomes a...

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Explain how proteomics is considered by some to be even more important than genome sequencing.

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There are limits to what genome sequenci...

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Which of these techniques would a company that analyzes personal genomes most likely use?


A) DNA cloning
B) gene cloning
C) PCR
D) fingerprinting

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Match the following techniques with the descriptions listed below. -used to replace a normal gene with a defective one to see the effect


A) whole-genome shotgun sequencing
B) Illumina/Solexa sequencing
C) Sanger sequencing
D) DNA microarray analysis
E) gene knockout
F) gene knockdown

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E

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